BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E08SP1|AL430247
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig910 1781 0.0
>3x_Contig910
Length = 3140
Score = 1781 bits (898), Expect = 0.0
Identities = 916/920 (99%), Gaps = 2/920 (0%)
Strand = Plus / Minus
Query: 1 gatcagaattgaatctcgttccaatgtcgttcagtccatacgataccacgawatacaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1019 gatcagaattgaatctcgttccaatgtcgttcagtccatacgataccacgatatacaacg 960
Query: 61 aggttacaggtattggtgcatcgattgattcattttacgaaactgctcttaagggttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 aggttacaggtattggtgcatcgattgattcattttacgaaactgctcttaagggttcca 900
Query: 121 tcttattcgatgattcgtggctctatagtgtgtgggaaactgcaatatccgcccttaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 tcttattcgatgattcgtggctctatagtgtgtgggaaactgcaatatccgcccttaact 840
Query: 181 cttactcaaagacagattggttctacagtaacgttggagtatctcatggtaaaactgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cttactcaaagacagattggttctacagtaacgttggagtatctcatggtaaaactgtcg 780
Query: 241 ttctttggatagattcgttaagtgctttctttcctggtctactgactttagatggaaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ttctttggatagattcgttaagtgctttctttcctggtctactgactttagatggaaggc 720
Query: 301 tggaagatgcaaggaagaaacacataatgttttccaaacatatggtctacatacgagtgg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 719 tggaagatgcaaggaagaaacacataatgttttccaaac-tatggtctacatacg-gtgg 662
Query: 361 tatcccagaaagatggaactttgtgcaatcgccaccgaccaccgaagaattagactcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatcccagaaagatggaactttgtgcaatcgccaccgaccaccgaagaattagactcacc 602
Query: 421 ctcattgtcgatagatttagaatggtatccattgagtccggagttcattgaatcgacgta 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 601 ctcattgtcgatagatttagaatggtatccattgagaccggagttcattgaatcgacgta 542
Query: 481 ttacctttacagagccactaaagacgtttattatttgaatatcggtattcgaattctaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttacctttacagagccactaaagacgtttattatttgaatatcggtattcgaattctaaa 482
Query: 541 agatctacagcatcgcttcaagactaggtgtggatttgcggggctacaggatgtgactac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatctacagcatcgcttcaagactaggtgtggatttgcggggctacaggatgtgactac 422
Query: 601 tggagaagttcaagaccgaatggaatcatttgtcctaggggagacgttgaagtatctgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggagaagttcaagaccgaatggaatcatttgtcctaggggagacgttgaagtatctgta 362
Query: 661 tttattgttcgatgaggataacgaattgcatacaacgctatggaatcatattttcagtac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttattgttcgatgaggataacgaattgcatacaacgctatggaatcatattttcagtac 302
Query: 721 agaagcgcatccattctggatcgatgtgggtttaaagagacgttacgaatcatacaggag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagcgcatccattctggatcgatgtgggtttaaagagacgttacgaatcatacaggag 242
Query: 781 ggaagcagacccacctcatgttactacagaaatgtaccagttccatttgctaaaggcgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaagcagacccacctcatgttactacagaaatgtaccagttccatttgctaaaggcgaa 182
Query: 841 aaactggatgagaaggaccaaatctcctaacaggagaattaaccatgctaagaagaaact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaactggatgagaaggaccaaatctcctaacaggagaattaaccatgctaagaagaaact 122
Query: 901 agatggccaatgtatttctc 920
||||||||||||||||||||
Sbjct: 121 agatggccaatgtatttctc 102
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5860
Number of Sequences: 1807
Number of extensions: 5860
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)